Bradford Condon PhD

Bioinformatics, Web & Mobile Development


databases

Welcome to Tripal Country!

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Tripal feature annotations might be a little unintuitive, especially for non-biologists. This guide is to solidify my own knowledge of what goes where and why: hopefully it will be helpful to some developers as well.

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Welcome to Tripal Country!

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This is a short guide to demonstrate how to create new bundle types with Chado storage in Tripal 3. It was originally written as instructions for my Tripal Alchemist module. There is a similar guide on tripal.info which you can also review.

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The 2018 Tripal hackathon took place at the Plant & Animal Genomes conference in San Diego January 11th & 12th. I’d post the itinerary and workshop sessions were, but I didn’t take great notes. Instead, I’ll share about the sessions I took part in. Thursday we discussed Controlled Vocabularies in the morning, and Tripal Core issues (generally Tripal 3 issues) in the afternoon. Friday was a general round-table and a Tripal 3 bundles and fields live demo.

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As a Tripal developer, one of the fun things I get to do is contribute not only to the Tripal project, but also other parts of GMOD, the Generic Model Organism Database Project. I attended the January 10th 2018 GMOD hackathon at the Plant and Animal Genome XXVI conference hoping to make a few small changes to Chado, the SQL database schema that HardwoodGenomics uses with Tripal.

GMOD CHADO

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